.. currentmodule:: brian Examples ======== These examples cover some basic topics in writing Brian scripts in Python. The complete source code for the examples is available in the examples folder in the extras package. .. EXAMPLES TOCTREE .. toctree:: :maxdepth: 1 .. _examples-audition: audition -------- .. toctree:: :maxdepth: 1 examples-audition_licklider examples-audition_jeffress examples-audition_filterbank .. _examples-multiprocessing: multiprocessing --------------- .. toctree:: :maxdepth: 1 examples-multiprocessing_multiple_runs_with_gui examples-multiprocessing_multiple_runs_simple examples-multiprocessing_taskfarm .. _examples-plasticity: plasticity ---------- .. toctree:: :maxdepth: 1 examples-plasticity_short_term_plasticity2 examples-plasticity_STDP1 examples-plasticity_STDP2 examples-plasticity_short_term_plasticity .. _examples-hears: hears ----- .. toctree:: :maxdepth: 1 examples-hears_sounds examples-hears_ircam_hrtf examples-hears_butterworth examples-hears_time_varying_filter2 examples-hears_time_varying_filter1 examples-hears_dcgc examples-hears_artificial_vowels examples-hears_IIRfilterbank examples-hears_gammatone examples-hears_cochleagram examples-hears_simple_anf examples-hears_sound_localisation_model examples-hears_linear_gammachirp examples-hears_online_computation examples-hears_log_gammachirp examples-hears_drnl examples-hears_cochlear_models examples-hears_approximate_gammatone .. _examples-hears-tan_carney_2003: hears/tan_carney_2003 --------------------- .. toctree:: :maxdepth: 1 examples-hears-tan_carney_2003_tan_carney_Fig11 examples-hears-tan_carney_2003_tan_carney_Fig7 examples-hears-tan_carney_2003_tan_carney_simple_test .. _examples-electrophysiology: electrophysiology ----------------- .. toctree:: :maxdepth: 1 examples-electrophysiology_compensation_ex2_spikes examples-electrophysiology_bridge examples-electrophysiology_SEVC examples-electrophysiology_threshold_analysis examples-electrophysiology_AEC examples-electrophysiology_compensation_ex1 examples-electrophysiology_DCC examples-electrophysiology_compensation_ex3_quality examples-electrophysiology_voltageclamp .. _examples-twister: twister ------- .. toctree:: :maxdepth: 1 examples-twister_PeterDiehl examples-twister_FriedemannZenke examples-twister_PierreYger examples-twister_anonymous examples-twister_MicheleGiugliano examples-twister_QuentinPauluis .. _examples-misc: misc ---- .. toctree:: :maxdepth: 1 examples-misc_rate_model examples-misc_I-F_curve examples-misc_COBAHH examples-misc_timed_array examples-misc_pulsepacket examples-misc_stim2d examples-misc_I-F_curve2 examples-misc_current_clamp examples-misc_CUBA examples-misc_spikes_io examples-misc_non_reliability examples-misc_poisson examples-misc_multipleclocks examples-misc_two_neurons examples-misc_phase_locking examples-misc_realtime_plotting examples-misc_van_rossum_metric examples-misc_remotecontrolclient examples-misc_adaptive_threshold examples-misc_delays examples-misc_heterogeneous_delays examples-misc_expIF_network examples-misc_spike_triggered_average examples-misc_noisy_ring examples-misc_correlated_inputs examples-misc_HodgkinHuxley examples-misc_correlated_inputs2 examples-misc_gap_junctions examples-misc_transient_sync examples-misc_adaptive examples-misc_topographic_map examples-misc_linked_var examples-misc_named_threshold examples-misc_minimalexample examples-misc_stopping examples-misc_using_classes examples-misc_poissongroup examples-misc_topographic_map2 examples-misc_leaky_if examples-misc_mirollo_strogatz examples-misc_COBA examples-misc_ring examples-misc_after_potential examples-misc_cable examples-misc_reliability examples-misc_if examples-misc_remotecontrolserver .. _examples-modelfitting: modelfitting ------------ .. toctree:: :maxdepth: 1 examples-modelfitting_modelfitting_groups examples-modelfitting_modelfitting_machines examples-modelfitting_modelfitting .. _examples-frompapers: frompapers ---------- .. toctree:: :maxdepth: 1 examples-frompapers_Brunel_Hakim_1999 examples-frompapers_Brette_Gerstner_2005 examples-frompapers_Rothman_Manis_2003 examples-frompapers_Plakiewicz_Brette_2010 examples-frompapers_Goodman_Brette_2010 examples-frompapers_Brette_2004 examples-frompapers_Rossant_et_al_2011 examples-frompapers_Wang_Buszaki_1996 examples-frompapers_Vogels_et_al_2011 examples-frompapers_Diesmann_et_al_1999_longer examples-frompapers_Diesmann_et_al_1999 examples-frompapers_Platkiewicz_Brette_2011 examples-frompapers_Sturzl_et_al_2000 examples-frompapers_Guetig_Sompolinsky_2009 examples-frompapers_Brette_Guigon_2003 examples-frompapers_Muller_et_al_2011 examples-frompapers_Rossant_et_al_2011bis examples-frompapers_Touboul_Brette_2008 examples-frompapers_Kremer_et_al_2011 .. _examples-frompapers-computing with neural synchrony-coincidence detection and synchrony: frompapers/computing with neural synchrony/coincidence detection and synchrony ------------------------------------------------------------------------------ .. toctree:: :maxdepth: 1 examples-frompapers-computing with neural synchrony-coincidence detection and synchrony_Fig6_shared_variability examples-frompapers-computing with neural synchrony-coincidence detection and synchrony_Fig5E_precision_reliability examples-frompapers-computing with neural synchrony-coincidence detection and synchrony_Fig5D_reproducibility examples-frompapers-computing with neural synchrony-coincidence detection and synchrony_Fig1C examples-frompapers-computing with neural synchrony-coincidence detection and synchrony_Fig1F_ROC .. _examples-frompapers-computing with neural synchrony-hearing: frompapers/computing with neural synchrony/hearing -------------------------------------------------- .. toctree:: :maxdepth: 1 examples-frompapers-computing with neural synchrony-hearing_Fig12A_Goodman_Brette_2010 examples-frompapers-computing with neural synchrony-hearing_Fig7A_Jeffress examples-frompapers-computing with neural synchrony-hearing_Fig7B_Licklider .. _examples-frompapers-computing with neural synchrony-duration selectivity: frompapers/computing with neural synchrony/duration selectivity --------------------------------------------------------------- .. toctree:: :maxdepth: 1 examples-frompapers-computing with neural synchrony-duration selectivity_Fig2A_synchrony_partition examples-frompapers-computing with neural synchrony-duration selectivity_Fig1A_rebound_neurons examples-frompapers-computing with neural synchrony-duration selectivity_Fig2C_decoding_synchrony examples-frompapers-computing with neural synchrony-duration selectivity_Fig4_duration_stdp examples-frompapers-computing with neural synchrony-duration selectivity_params examples-frompapers-computing with neural synchrony-duration selectivity_Fig1D_duration_selectivity .. _examples-frompapers-computing with neural synchrony-olfaction: frompapers/computing with neural synchrony/olfaction ---------------------------------------------------- .. toctree:: :maxdepth: 1 examples-frompapers-computing with neural synchrony-olfaction_Fig11B_olfaction_stdp_testing examples-frompapers-computing with neural synchrony-olfaction_Fig11B_olfaction_stdp_learning examples-frompapers-computing with neural synchrony-olfaction_Fig9B_olfaction examples-frompapers-computing with neural synchrony-olfaction_params .. _examples-interface: interface --------- .. toctree:: :maxdepth: 1 examples-interface_interface .. _examples-synapses: synapses -------- .. toctree:: :maxdepth: 1 examples-synapses_licklider examples-synapses_probabilistic_synapses examples-synapses_CUBA examples-synapses_delayed_stdp examples-synapses_jeffress examples-synapses_poisson_synapses examples-synapses_gapjunctions examples-synapses_probabilistic_synapses2 examples-synapses_multiple_delays examples-synapses_one_synapse_bis examples-synapses_two_synapses examples-synapses_noisy_ring examples-synapses_nonlinear_synapses examples-synapses_short_term_plasticity2 examples-synapses_one_synapse examples-synapses_STDP1 examples-synapses_transient_sync examples-synapses_synapse_construction examples-synapses_Diesmann_et_al_1999 examples-synapses_barrelcortex examples-synapses_short_term_plasticity examples-synapses_STDP1_bis examples-synapses_weightmonitor